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AlphaFold monomer V2.0 prediction for 54S ribosomal protein RML2, mitochondrial (P32611)
Analyse AlphaFold monomer V2.0 prediction for 54S ribosomal protein RML2, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P32611
- Type
- protein
- Length
- 393 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- 54S ribosomal protein RML2, mitochondrial
- UniProt
- P32611
- Pockets
- 3 · best druggability 0.53
Structure
1 distinct chain · 16% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 54S ribosomal protein RML2, mitochondrial | protein | 393 | 16% helix, 20% strand | P32611 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 292 | 0.53 | 0.75 | 35 | empty |
| 2 | 123 | 0.43 | 0.76 | 20 | empty |
| 3 | 95 | 0.33 | 0.73 | 21 | empty |
Compared structures
- 5MRF · Structure of the yeast mitochondrial ribosome - Class C · an experimental structure of the same protein · chain A against B, TM-score 0.79
- 5MRE · Structure of the yeast mitochondrial ribosome - Class B · an experimental structure of the same protein · chain A against B, TM-score 0.79
- 5MRC · Structure of the yeast mitochondrial ribosome - Class A · an experimental structure of the same protein · chain A against B, TM-score 0.79
- 3J6B · Structure of the yeast mitochondrial large ribosomal subunit · an experimental structure of the same protein · chain A against B, TM-score 0.74
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32611
- Elsewhere: UniProt P32611 · AlphaFold DB P32611
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