Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein VAR1, mitochondrial (Q35905)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein VAR1, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q35905
- Type
- protein
- Length
- 373 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- Ribosomal protein VAR1, mitochondrial
- UniProt
- Q35905
- Pockets
- 6 · best druggability 0.67
Structure
1 distinct chain · 43% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein VAR1, mitochondrial | protein | 373 | 43% helix, 20% strand | Q35905 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 470 | 0.67 | 0.78 | 35 | empty |
| 2 | 175 | 0.53 | 0.79 | 26 | empty |
| 3 | 185 | 0.47 | 0.76 | 17 | empty |
| 4 | 60 | 0.32 | 0.76 | 13 | empty |
| 5 | 57 | 0.30 | 0.75 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q35905
- Elsewhere: UniProt Q35905 · AlphaFold DB Q35905
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