Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein VAR1, mitochondrial (Q8M355)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein VAR1, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8M355
- Type
- protein
- Length
- 326 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xff03B2db4e8d8d817F3CF3ad2b4A58B4fae7131A
- Molecule
- Ribosomal protein VAR1, mitochondrial
- UniProt
- Q8M355
- Pockets
- 6 · best druggability 0.66
Structure
1 distinct chain · 40% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein VAR1, mitochondrial | protein | 326 | 40% helix, 22% strand | Q8M355 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 508 | 0.66 | 0.77 | 42 | empty |
| 2 | 372 | 0.62 | 0.77 | 37 | empty |
| 3 | 52 | 0.44 | 0.84 | 11 | empty |
| 4 | 136 | 0.42 | 0.75 | 27 | empty |
| 5 | 52 | 0.39 | 0.81 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8M355
- Elsewhere: UniProt Q8M355 · AlphaFold DB Q8M355
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