AlphaFold monomer V2.0 prediction for 39S ribosomal protein L47, mitochondrial (Q9HD33)

Structure

1 distinct chain · 48% helix, 4% strand (DSSP).

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 7PO4 · Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded… · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 7QI4 · Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA) · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 7QI5 · Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A… · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 8OIR · 55S human mitochondrial ribosome with mtRF1 and P-site tRNA · an experimental structure of the same protein · chain A against BF, TM-score 0.71
• 8OIT · 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA · an experimental structure of the same protein · chain A against BF, TM-score 0.71
• 8ANY · Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs… · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 7QI6 · Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 7ODR · State A of the human mitoribosomal large subunit assembly intermediate · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 8PK0 · human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7 · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 7ODT · State C of the human mitoribosomal large subunit assembly intermediate · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 8QSJ · Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7 · an experimental structure of the same protein · chain A against Y, TM-score 0.71
• 6ZM6 · Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA · an experimental structure of the same protein · chain A against Y, TM-score 0.71

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q9HD33
• Elsewhere: UniProt Q9HD33 · AlphaFold DB Q9HD33