Research workbench
AlphaFold monomer V2.0 prediction for ribosomal large subunit pseudouridine synthase B (Q9PAP2)
Analyse AlphaFold monomer V2.0 prediction for ribosomal large subunit pseudouridine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9PAP2
- Type
- protein
- Length
- 476 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Ribosomal large subunit pseudouridine synthase B
- UniProt
- Q9PAP2
- Pockets
- 4 · best druggability 0.60
Structure
1 distinct chain · 12% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal large subunit pseudouridine synthase B | protein | 476 | 12% helix, 19% strand | Q9PAP2 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 377 | 0.60 | 0.77 | 32 | empty |
| 2 | 172 | 0.59 | 0.82 | 28 | empty |
| 3 | 165 | 0.57 | 0.81 | 35 | empty |
| 4 | 160 | 0.41 | 0.73 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PAP2
- Elsewhere: UniProt Q9PAP2 · AlphaFold DB Q9PAP2
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