Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase M (B1KQX8)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1KQX8
- Type
- protein
- Length
- 358 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- Ribosomal RNA large subunit methyltransferase M
- UniProt
- B1KQX8
- Pockets
- 6 · best druggability 0.53
Structure
1 distinct chain · 35% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase M | protein | 358 | 35% helix, 23% strand | B1KQX8 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 108 | 0.53 | 0.83 | 28 | empty |
| 2 | 64 | 0.45 | 0.83 | 16 | empty |
| 3 | 136 | 0.42 | 0.75 | 21 | empty |
| 4 | 101 | 0.37 | 0.75 | 16 | empty |
| 5 | 51 | 0.26 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1KQX8
- Elsewhere: UniProt B1KQX8 · AlphaFold DB B1KQX8
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.