Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase M (A4Y4Y0)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4Y4Y0
- Type
- protein
- Length
- 361 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9d7467021Db73aeAa95A2Ab5150B26f506bE6044
- Molecule
- Ribosomal RNA large subunit methyltransferase M
- UniProt
- A4Y4Y0
- Pockets
- 2 · best druggability 0.56
Structure
1 distinct chain · 33% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase M | protein | 361 | 33% helix, 24% strand | A4Y4Y0 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 173 | 0.56 | 0.80 | 35 | empty |
| 2 | 115 | 0.39 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4Y4Y0
- Elsewhere: UniProt A4Y4Y0 · AlphaFold DB A4Y4Y0
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