Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase M (A4WDY6)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4WDY6
- Type
- protein
- Length
- 366 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x34226a3F7f145422667F3619BC024BE15dFB0737
- Molecule
- Ribosomal RNA large subunit methyltransferase M
- UniProt
- A4WDY6
- Pockets
- 3 · best druggability 0.44
Structure
1 distinct chain · 33% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase M | protein | 366 | 33% helix, 23% strand | A4WDY6 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 128 | 0.44 | 0.77 | 31 | empty |
| 2 | 87 | 0.35 | 0.75 | 17 | empty |
| 3 | 56 | 0.23 | 0.72 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4WDY6
- Elsewhere: UniProt A4WDY6 · AlphaFold DB A4WDY6
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