Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase K/L (Q1CGJ3)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1CGJ3
- Type
- protein
- Length
- 706 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x10CE6839fAB1d16e972AA2437070Dd76D75b7C48
- Molecule
- Ribosomal RNA large subunit methyltransferase K/L
- UniProt
- Q1CGJ3
- Pockets
- 8 · best druggability 0.69
Structure
1 distinct chain · 36% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase K/L | protein | 706 | 36% helix, 25% strand | Q1CGJ3 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 450 | 0.69 | 0.80 | 50 | empty |
| 2 | 375 | 0.67 | 0.80 | 43 | empty |
| 3 | 583 | 0.65 | 0.76 | 53 | empty |
| 4 | 315 | 0.55 | 0.75 | 36 | empty |
| 5 | 68 | 0.45 | 0.83 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1CGJ3
- Elsewhere: UniProt Q1CGJ3 · AlphaFold DB Q1CGJ3
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