Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase K/L (A1JMQ6)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1JMQ6
- Type
- protein
- Length
- 706 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- Ribosomal RNA large subunit methyltransferase K/L
- UniProt
- A1JMQ6
- Pockets
- 10 · best druggability 0.70
Structure
1 distinct chain · 35% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase K/L | protein | 706 | 35% helix, 25% strand | A1JMQ6 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 647 | 0.70 | 0.78 | 68 | empty |
| 2 | 434 | 0.67 | 0.80 | 52 | empty |
| 3 | 608 | 0.67 | 0.77 | 55 | empty |
| 4 | 270 | 0.54 | 0.76 | 35 | empty |
| 5 | 66 | 0.45 | 0.83 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1JMQ6
- Elsewhere: UniProt A1JMQ6 · AlphaFold DB A1JMQ6
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