Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase K/L (Q5H029)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5H029
- Type
- protein
- Length
- 711 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x39de2D795518fE76cfFb59D4ca178ef66cF6B3a4
- Molecule
- Ribosomal RNA large subunit methyltransferase K/L
- UniProt
- Q5H029
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 36% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase K/L | protein | 711 | 36% helix, 26% strand | Q5H029 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 642 | 0.72 | 0.79 | 59 | empty |
| 2 | 254 | 0.66 | 0.83 | 33 | empty |
| 3 | 271 | 0.55 | 0.76 | 32 | empty |
| 4 | 368 | 0.55 | 0.74 | 44 | empty |
| 5 | 125 | 0.40 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5H029
- Elsewhere: UniProt Q5H029 · AlphaFold DB Q5H029
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