Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase K/L (Q0HJZ9)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0HJZ9
- Type
- protein
- Length
- 713 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x922634802C3497a6A458944C1356490ce4100c17
- Molecule
- Ribosomal RNA large subunit methyltransferase K/L
- UniProt
- Q0HJZ9
- Pockets
- 6 · best druggability 0.76
Structure
1 distinct chain · 36% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase K/L | protein | 713 | 36% helix, 25% strand | Q0HJZ9 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 907 | 0.76 | 0.79 | 85 | empty |
| 2 | 506 | 0.68 | 0.78 | 53 | empty |
| 3 | 189 | 0.54 | 0.79 | 27 | empty |
| 4 | 197 | 0.46 | 0.74 | 27 | empty |
| 5 | 68 | 0.45 | 0.83 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0HJZ9
- Elsewhere: UniProt Q0HJZ9 · AlphaFold DB Q0HJZ9
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