Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase K/L (B5F1U5)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5F1U5
- Type
- protein
- Length
- 702 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Ribosomal RNA large subunit methyltransferase K/L
- UniProt
- B5F1U5
- Pockets
- 8 · best druggability 0.70
Structure
1 distinct chain · 35% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase K/L | protein | 702 | 35% helix, 25% strand | B5F1U5 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 631 | 0.70 | 0.78 | 52 | empty |
| 2 | 439 | 0.68 | 0.80 | 49 | empty |
| 3 | 416 | 0.65 | 0.79 | 54 | empty |
| 4 | 295 | 0.53 | 0.75 | 44 | empty |
| 5 | 121 | 0.45 | 0.78 | 35 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5F1U5
- Elsewhere: UniProt B5F1U5 · AlphaFold DB B5F1U5
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