Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase K/L (B5YT79)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5YT79
- Type
- protein
- Length
- 702 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Ribosomal RNA large subunit methyltransferase K/L
- UniProt
- B5YT79
- Pockets
- 7 · best druggability 0.77
Structure
1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase K/L | protein | 702 | 34% helix, 25% strand | B5YT79 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 948 | 0.77 | 0.80 | 94 | empty |
| 2 | 376 | 0.64 | 0.79 | 48 | empty |
| 3 | 155 | 0.55 | 0.81 | 23 | empty |
| 4 | 269 | 0.52 | 0.75 | 37 | empty |
| 5 | 53 | 0.47 | 0.85 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5YT79
- Elsewhere: UniProt B5YT79 · AlphaFold DB B5YT79
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