Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase K/L (Q47Z09)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q47Z09
- Type
- protein
- Length
- 715 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- Ribosomal RNA large subunit methyltransferase K/L
- UniProt
- Q47Z09
- Pockets
- 10 · best druggability 0.68
Structure
1 distinct chain · 37% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase K/L | protein | 715 | 37% helix, 25% strand | Q47Z09 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 654 | 0.68 | 0.77 | 51 | empty |
| 2 | 471 | 0.67 | 0.78 | 48 | empty |
| 3 | 300 | 0.56 | 0.76 | 39 | empty |
| 4 | 66 | 0.55 | 0.88 | 20 | empty |
| 5 | 65 | 0.43 | 0.82 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q47Z09
- Elsewhere: UniProt Q47Z09 · AlphaFold DB Q47Z09
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