Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase K/L (B5FE19)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5FE19
- Type
- protein
- Length
- 705 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x58ccFdBDFD832A7AaEbF78524b91376F16D3662e
- Molecule
- Ribosomal RNA large subunit methyltransferase K/L
- UniProt
- B5FE19
- Pockets
- 11 · best druggability 0.71
Structure
1 distinct chain · 35% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase K/L | protein | 705 | 35% helix, 25% strand | B5FE19 |
Pockets
11 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 728 | 0.71 | 0.78 | 55 | empty |
| 2 | 508 | 0.68 | 0.78 | 61 | empty |
| 3 | 455 | 0.67 | 0.79 | 50 | empty |
| 4 | 113 | 0.43 | 0.77 | 23 | empty |
| 5 | 148 | 0.40 | 0.74 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5FE19
- Elsewhere: UniProt B5FE19 · AlphaFold DB B5FE19
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