Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase H (B7MFQ9)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B7MFQ9
- Type
- protein
- Length
- 155 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Ribosomal RNA large subunit methyltransferase H
- UniProt
- B7MFQ9
- Pockets
- 1 · best druggability 0.58
Structure
1 distinct chain · 45% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase H | protein | 155 | 45% helix, 22% strand | B7MFQ9 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 117 | 0.58 | 0.84 | 20 | empty |
Compared structures
- 5TWK · Crystal Structure of RlmH in Complex with Sinefungin · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 5TWJ · Crystal structure of rlmh in complex with S-adenosylmethionine · an experimental structure of the same protein · chain A against C, TM-score 0.98
- 5TWK · Crystal structure of rlmh in complex with sinefungin · an experimental structure of the same protein · chain A against C, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7MFQ9
- Elsewhere: UniProt B7MFQ9 · AlphaFold DB B7MFQ9
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