Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase F (A1JU40)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1JU40
- Type
- protein
- Length
- 335 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Ribosomal RNA large subunit methyltransferase F
- UniProt
- A1JU40
- Pockets
- 3 · best druggability 0.74
Structure
1 distinct chain · 40% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase F | protein | 335 | 40% helix, 17% strand | A1JU40 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 188 | 0.74 | 0.90 | 36 | empty |
| 2 | 736 | 0.72 | 0.78 | 62 | empty |
| 3 | 115 | 0.38 | 0.74 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1JU40
- Elsewhere: UniProt A1JU40 · AlphaFold DB A1JU40
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