Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase F (Q15VI3)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q15VI3
- Type
- protein
- Length
- 330 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Ribosomal RNA large subunit methyltransferase F
- UniProt
- Q15VI3
- Pockets
- 3 · best druggability 0.77
Structure
1 distinct chain · 37% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase F | protein | 330 | 37% helix, 17% strand | Q15VI3 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 939 | 0.77 | 0.80 | 92 | empty |
| 2 | 141 | 0.51 | 0.80 | 33 | empty |
| 3 | 79 | 0.30 | 0.73 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q15VI3
- Elsewhere: UniProt Q15VI3 · AlphaFold DB Q15VI3
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