Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase F (B5YS99)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5YS99
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80B89eAC204820Bfe8A7E83C5Cb1Ee4233C1B22C
- Molecule
- Ribosomal RNA large subunit methyltransferase F
- UniProt
- B5YS99
- Pockets
- 2 · best druggability 0.76
Structure
1 distinct chain · 41% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase F | protein | 308 | 41% helix, 18% strand | B5YS99 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 773 | 0.76 | 0.80 | 82 | empty |
| 2 | 94 | 0.37 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5YS99
- Elsewhere: UniProt B5YS99 · AlphaFold DB B5YS99
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