Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit methyltransferase E (Q138J5)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q138J5
- Type
- protein
- Length
- 235 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDD3e63910080aF99E09988eCd7428CfA2293d53d
- Molecule
- Ribosomal RNA large subunit methyltransferase E
- UniProt
- Q138J5
- Pockets
- 2 · best druggability 0.62
Structure
1 distinct chain · 36% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA large subunit methyltransferase E | protein | 235 | 36% helix, 22% strand | Q138J5 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 421 | 0.62 | 0.76 | 50 | empty |
| 2 | 90 | 0.32 | 0.73 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q138J5
- Elsewhere: UniProt Q138J5 · AlphaFold DB Q138J5
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