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AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd (Q2Y6W3)

Analyse AlphaFold monomer V2.0 prediction for 23S rRNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q2Y6W3
Type: protein
Length: 439 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xe9D866648c015EfcD61c462afEC39fc6c58DC2b5
Molecule: 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd
UniProt: Q2Y6W3
Pockets: 1 · best druggability 0.67

Structure

1 distinct chain · 27% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd	protein	439	27% helix, 30% strand	Q2Y6W3

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	539	0.67	0.78	79	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q2Y6W3
Elsewhere: UniProt Q2Y6W3 · AlphaFold DB Q2Y6W3

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