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AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd (Q46ZH7)

Analyse AlphaFold monomer V2.0 prediction for 23S rRNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q46ZH7
Type: protein
Length: 463 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xc4c27773Fe1F9E993e353448F6CC683426A69bdd
Molecule: 23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd
UniProt: Q46ZH7
Pockets: 2 · best druggability 0.65

Structure

1 distinct chain · 28% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	23S rRNA (URACIL(1939)-C(5))-methyltransferase rlmd	protein	463	28% helix, 30% strand	Q46ZH7

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	512	0.65	0.77	72	empty
2	56	0.41	0.81	16	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q46ZH7
Elsewhere: UniProt Q46ZH7 · AlphaFold DB Q46ZH7

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