Research workbench
AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(747)-C(5))-methyltransferase rlmc (Q9KL20)
Analyse AlphaFold monomer V2.0 prediction for 23S rRNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9KL20
- Type
- protein
- Length
- 375 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- 23S rRNA (URACIL(747)-C(5))-methyltransferase rlmc
- UniProt
- Q9KL20
- Pockets
- 4 · best druggability 0.67
Structure
1 distinct chain · 31% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 23S rRNA (URACIL(747)-C(5))-methyltransferase rlmc | protein | 375 | 31% helix, 29% strand | Q9KL20 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 459 | 0.67 | 0.78 | 55 | empty |
| 2 | 68 | 0.36 | 0.77 | 20 | empty |
| 3 | 57 | 0.30 | 0.75 | 12 | empty |
| 4 | 53 | 0.28 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KL20
- Elsewhere: UniProt Q9KL20 · AlphaFold DB Q9KL20
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.