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AlphaFold monomer V2.0 prediction for 23S rRNA (URACIL(747)-C(5))-methyltransferase rlmc (B8F5M9)
Analyse AlphaFold monomer V2.0 prediction for 23S rRNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8F5M9
- Type
- protein
- Length
- 389 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- 23S rRNA (URACIL(747)-C(5))-methyltransferase rlmc
- UniProt
- B8F5M9
- Pockets
- 3 · best druggability 0.59
Structure
1 distinct chain · 31% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 23S rRNA (URACIL(747)-C(5))-methyltransferase rlmc | protein | 389 | 31% helix, 26% strand | B8F5M9 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 252 | 0.59 | 0.79 | 42 | empty |
| 2 | 179 | 0.59 | 0.81 | 26 | empty |
| 3 | 78 | 0.39 | 0.78 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8F5M9
- Elsewhere: UniProt B8F5M9 · AlphaFold DB B8F5M9
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