Research workbench
AlphaFold monomer V2.0 prediction for 23S rRNA (guanosine-2'-O-)-methyltransferase rlmb (Q7VTK4)
Analyse AlphaFold monomer V2.0 prediction for 23S rRNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7VTK4
- Type
- protein
- Length
- 245 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- 23S rRNA (guanosine-2'-O-)-methyltransferase rlmb
- UniProt
- Q7VTK4
- Pockets
- 4 · best druggability 0.62
Structure
1 distinct chain · 40% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 23S rRNA (guanosine-2'-O-)-methyltransferase rlmb | protein | 245 | 40% helix, 23% strand | Q7VTK4 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 179 | 0.62 | 0.83 | 22 | empty |
| 2 | 159 | 0.45 | 0.75 | 22 | empty |
| 3 | 138 | 0.44 | 0.76 | 18 | empty |
| 4 | 69 | 0.34 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7VTK4
- Elsewhere: UniProt Q7VTK4 · AlphaFold DB Q7VTK4
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