Research workbench
AlphaFold monomer V2.0 prediction for 23S rRNA 5-hydroxycytidine C2501 synthase (P76104)
Analyse AlphaFold monomer V2.0 prediction for 23S rRNA 5-hydroxycytidine C2501 synthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P76104
- Type
- protein
- Length
- 653 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x64677615C9393A173EF1bc7e32328bA33C7F6966
- Molecule
- 23S rRNA 5-hydroxycytidine C2501 synthase
- UniProt
- P76104
- Pockets
- 6 · best druggability 0.77
Structure
1 distinct chain · 28% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 23S rRNA 5-hydroxycytidine C2501 synthase | protein | 653 | 28% helix, 28% strand | P76104 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 332 | 0.77 | 0.88 | 51 | empty |
| 2 | 173 | 0.59 | 0.82 | 29 | empty |
| 3 | 222 | 0.57 | 0.79 | 28 | empty |
| 4 | 51 | 0.30 | 0.76 | 14 | empty |
| 5 | 65 | 0.29 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P76104
- Elsewhere: UniProt P76104 · AlphaFold DB P76104
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