Research workbench
AlphaFold monomer V2.0 prediction for retinaldehyde-binding protein 1 (Q9Z275)
Analyse AlphaFold monomer V2.0 prediction for retinaldehyde-binding protein 1 (Q9Z275) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Z275
- Type
- protein
- Length
- 317 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Retinaldehyde-binding protein 1
- UniProt
- Q9Z275
- Pockets
- 6 · best druggability 0.82
Structure
1 distinct chain · 52% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Retinaldehyde-binding protein 1 | protein | 317 | 52% helix, 10% strand | Q9Z275 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 145 | 0.82 | 0.97 | 24 | empty |
| 2 | 106 | 0.56 | 0.84 | 20 | empty |
| 3 | 62 | 0.37 | 0.78 | 15 | empty |
| 4 | 97 | 0.36 | 0.74 | 20 | empty |
| 5 | 51 | 0.34 | 0.78 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Z275
- Elsewhere: UniProt Q9Z275 · AlphaFold DB Q9Z275
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