Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L6 (Q5JJG4)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L6 (Q5JJG4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5JJG4
- Type
- protein
- Length
- 184 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97265405D6859EE2a3BD1Ed52eC900D81e668aDa
- Molecule
- 50S ribosomal protein L6
- UniProt
- Q5JJG4
- Pockets
- 1 · best druggability 0.28
Structure
1 distinct chain · 21% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L6 | protein | 184 | 21% helix, 43% strand | Q5JJG4 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.28 | 0.74 | 11 | empty |
Compared structures
- 6SKG · Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain · an experimental structure of the same protein · chain A against BG, TM-score 0.96
- 6SKF · Cryo-EM Structure of T. kodakarensis 70S ribosome · an experimental structure of the same protein · chain A against BG, TM-score 0.96
- 6TH6 · Cryo-EM Structure of T. kodakarensis 70S ribosome · an experimental structure of the same protein · chain A against BG, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JJG4
- Elsewhere: UniProt Q5JJG4 · AlphaFold DB Q5JJG4
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