Research workbench
AlphaFold monomer V2.0 prediction for 60S ribosomal protein L6 (P47911)
Analyse AlphaFold monomer V2.0 prediction for 60S ribosomal protein L6 (P47911) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P47911
- Type
- protein
- Length
- 296 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9d2ff7267DAbeF5314975b14749fa9ca05f4880a
- Molecule
- 60S ribosomal protein L6
- UniProt
- P47911
- Pockets
- 1 · best druggability 0.48
Structure
1 distinct chain · 16% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 60S ribosomal protein L6 | protein | 296 | 16% helix, 16% strand | P47911 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 179 | 0.48 | 0.75 | 24 | empty |
Compared structures
- 7CPV · Cryo-EM structure of 80S ribosome from mouse testis · an experimental structure of the same protein · chain A against LE, TM-score 0.76
- 7CPU · Cryo-EM structure of 80S ribosome from mouse kidney · an experimental structure of the same protein · chain A against LE, TM-score 0.76
- 7LS1 · 80S ribosome from mouse bound to eEF2 (Class II) · an experimental structure of the same protein · chain A against H2, TM-score 0.73
- 7LS2 · 80S ribosome from mouse bound to eEF2 (Class I) · an experimental structure of the same protein · chain A against H2, TM-score 0.73
- 6SWA · Mus musculus brain neocortex ribosome 60S bound to Ebp1 · an experimental structure of the same protein · chain A against E, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P47911
- Elsewhere: UniProt P47911 · AlphaFold DB P47911
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