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AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (P41202)

Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L5 (P41202) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P41202
Type: protein
Length: 178 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
Molecule: 50S ribosomal protein L5
UniProt: P41202
Pockets: 1 · best druggability 0.27

Structure

1 distinct chain · 31% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L5	protein	178	31% helix, 25% strand	P41202

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.27	0.73	12	empty

Compared structures

8HKZ · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against AL5P, TM-score 0.84

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P41202
Elsewhere: UniProt P41202 · AlphaFold DB P41202

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