Research workbench
AlphaFold monomer V2.0 prediction for 60S ribosomal protein L4-B (P02385)
Analyse AlphaFold monomer V2.0 prediction for 60S ribosomal protein L4-B (P02385) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P02385
- Type
- protein
- Length
- 401 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8873c1b38A148297C06f7797E3A5aBaef6A3Feba
- Molecule
- 60S ribosomal protein L4-B
- UniProt
- P02385
- Pockets
- 2 · best druggability 0.54
Structure
1 distinct chain · 41% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 60S ribosomal protein L4-B | protein | 401 | 41% helix, 9% strand | P02385 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 193 | 0.54 | 0.79 | 31 | empty |
| 2 | 77 | 0.34 | 0.75 | 16 | empty |
Compared structures
- 7OYC · Cryo-EM structure of the Xenopus egg 80S ribosome · an experimental structure of the same protein · chain A against C1, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02385
- Elsewhere: UniProt P02385 · AlphaFold DB P02385
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