Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L3 (B8GKD3)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L3 (B8GKD3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8GKD3
- Type
- protein
- Length
- 337 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA3FcDA3b64371bD5fCb5a1c55B5C6Ce480247b33
- Molecule
- 50S ribosomal protein L3
- UniProt
- B8GKD3
- Pockets
- 4 · best druggability 0.43
Structure
1 distinct chain · 15% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L3 | protein | 337 | 15% helix, 31% strand | B8GKD3 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 174 | 0.43 | 0.74 | 22 | empty |
| 2 | 119 | 0.40 | 0.75 | 24 | empty |
| 3 | 57 | 0.28 | 0.74 | 14 | empty |
| 4 | 50 | 0.27 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8GKD3
- Elsewhere: UniProt B8GKD3 · AlphaFold DB B8GKD3
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