Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L3 (Q9HPD4)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L3 (Q9HPD4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9HPD4
- Type
- protein
- Length
- 335 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3BD960301fFCd02d42e55a21D409c3bD1BA31b78
- Molecule
- 50S ribosomal protein L3
- UniProt
- Q9HPD4
- Pockets
- 4 · best druggability 0.43
Structure
1 distinct chain · 12% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L3 | protein | 335 | 12% helix, 33% strand | Q9HPD4 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 146 | 0.43 | 0.75 | 24 | empty |
| 2 | 129 | 0.37 | 0.73 | 17 | empty |
| 3 | 64 | 0.36 | 0.78 | 19 | empty |
| 4 | 71 | 0.34 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HPD4
- Elsewhere: UniProt Q9HPD4 · AlphaFold DB Q9HPD4
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