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AlphaFold monomer V2.0 prediction for 50S ribosomal protein L2 (B7MCT2)

Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L2 (B7MCT2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: B7MCT2
Type: protein
Length: 273 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
Molecule: 50S ribosomal protein L2
UniProt: B7MCT2
Pockets: 4 · best druggability 0.50

Structure

1 distinct chain · 11% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L2	protein	273	11% helix, 30% strand	B7MCT2

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	229	0.50	0.75	34	empty
2	68	0.39	0.79	19	empty
3	62	0.34	0.76	10	empty
4	52	0.23	0.72	16	empty

Compared structures

5WFS · 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) · an experimental structure of the same protein · chain A against C, TM-score 0.99
6C4I · Conformation of methylated GGQ in the peptidyl transferase center during translation… · an experimental structure of the same protein · chain A against C, TM-score 0.99
5WF0 · 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) · an experimental structure of the same protein · chain A against C, TM-score 0.99
6DNC · E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon · an experimental structure of the same protein · chain A against F, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B7MCT2
Elsewhere: UniProt B7MCT2 · AlphaFold DB B7MCT2

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