Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L25 (B3CMB8)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L25 (B3CMB8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3CMB8
- Type
- protein
- Length
- 203 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- 50S ribosomal protein L25
- UniProt
- B3CMB8
- Pockets
- 2 · best druggability 0.38
Structure
1 distinct chain · 15% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L25 | protein | 203 | 15% helix, 43% strand | B3CMB8 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.38 | 0.78 | 14 | empty |
| 2 | 52 | 0.25 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3CMB8
- Elsewhere: UniProt B3CMB8 · AlphaFold DB B3CMB8
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