Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L19 (P75133)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L19 (P75133) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P75133
- Type
- protein
- Length
- 119 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x92aBF7FbE5b4A62e611253Dd271820D19bCD91cc
- Molecule
- 50S ribosomal protein L19
- UniProt
- P75133
- Pockets
- 1 · best druggability 0.36
Structure
1 distinct chain · 18% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L19 | protein | 119 | 18% helix, 43% strand | P75133 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.36 | 0.77 | 16 | empty |
Compared structures
- 8P7X · Mycoplasma pneumoniae 70S ribosome in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against o, TM-score 0.92
- 8P8B · Mycoplasma pneumoniae large ribosomal subunit in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against o, TM-score 0.92
- 8P7Y · Mycoplasma pneumoniae 70S ribosome with second S4 protein on large subunit · an experimental structure of the same protein · chain A against o, TM-score 0.92
- 8P8W · Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (following 70S) · an experimental structure of the same protein · chain A against o, TM-score 0.91
- 8P8V · Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (leading 70S) · an experimental structure of the same protein · chain A against o, TM-score 0.91
- 7P6Z · Mycoplasma pneumoniae 70S ribosome in untreated cells · an experimental structure of the same protein · chain A against o, TM-score 0.91
- 7OOD · Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol- treated cells · an experimental structure of the same protein · chain A against o, TM-score 0.91
- 7OOD · Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against o, TM-score 0.91
- 7PAL · 70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against o, TM-score 0.89
- 7PHB · 70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae… · an experimental structure of the same protein · chain A against o, TM-score 0.88
- 7PAO · 70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against o, TM-score 0.88
- 7PAI · 70S ribosome with P-site tRNA in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against o, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P75133
- Elsewhere: UniProt P75133 · AlphaFold DB P75133
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