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AlphaFold monomer V2.0 prediction for 50S ribosomal protein L19 (P75133)

Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L19 (P75133) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
P75133
Type
protein
Length
119 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x92aBF7FbE5b4A62e611253Dd271820D19bCD91cc
Molecule
50S ribosomal protein L19
UniProt
P75133
Pockets
1 · best druggability 0.36

Structure

1 distinct chain · 18% helix, 43% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A50S ribosomal protein L19protein11918% helix, 43% strandP75133

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1760.360.7716empty

Compared structures

  • 8P7X · Mycoplasma pneumoniae 70S ribosome in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against o, TM-score 0.92
  • 8P8B · Mycoplasma pneumoniae large ribosomal subunit in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against o, TM-score 0.92
  • 8P7Y · Mycoplasma pneumoniae 70S ribosome with second S4 protein on large subunit · an experimental structure of the same protein · chain A against o, TM-score 0.92
  • 8P8W · Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (following 70S) · an experimental structure of the same protein · chain A against o, TM-score 0.91
  • 8P8V · Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (leading 70S) · an experimental structure of the same protein · chain A against o, TM-score 0.91
  • 7P6Z · Mycoplasma pneumoniae 70S ribosome in untreated cells · an experimental structure of the same protein · chain A against o, TM-score 0.91
  • 7OOD · Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol- treated cells · an experimental structure of the same protein · chain A against o, TM-score 0.91
  • 7OOD · Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells · an experimental structure of the same protein · chain A against o, TM-score 0.91
  • 7PAL · 70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against o, TM-score 0.89
  • 7PHB · 70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae… · an experimental structure of the same protein · chain A against o, TM-score 0.88
  • 7PAO · 70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against o, TM-score 0.88
  • 7PAI · 70S ribosome with P-site tRNA in Mycoplasma pneumoniae cells · an experimental structure of the same protein · chain A against o, TM-score 0.88

Analyse

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