Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L17 (Q7A087)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L17 (Q7A087) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7A087
- Type
- protein
- Length
- 122 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xccF455bba6DB3C6e0487F83C4A44ad0E706F1047
- Molecule
- 50S ribosomal protein L17
- UniProt
- Q7A087
- Pockets
- 1 · best druggability 0.31
Structure
1 distinct chain · 48% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L17 | protein | 122 | 48% helix, 21% strand | Q7A087 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.31 | 0.74 | 14 | empty |
Compared structures
- 8Y36 · cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with… · an experimental structure of the same protein · chain A against L, TM-score 0.97
- 8Y37 · Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190. · an experimental structure of the same protein · chain A against L, TM-score 0.96
- 8Y39 · cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with… · an experimental structure of the same protein · chain A against L, TM-score 0.96
- 8Y38 · Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with… · an experimental structure of the same protein · chain A against L, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7A087
- Elsewhere: UniProt Q7A087 · AlphaFold DB Q7A087
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