Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L13 (Q5JJF6)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L13 (Q5JJF6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5JJF6
- Type
- protein
- Length
- 142 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2CfD32b173ecf9861B5DB5dFF2452f89E7bCADff
- Molecule
- 50S ribosomal protein L13
- UniProt
- Q5JJF6
- Pockets
- 1 · best druggability 0.40
Structure
1 distinct chain · 47% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L13 | protein | 142 | 47% helix, 15% strand | Q5JJF6 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 91 | 0.40 | 0.77 | 18 | empty |
Compared structures
- 6TH6 · Cryo-EM Structure of T. kodakarensis 70S ribosome · an experimental structure of the same protein · chain A against BK, TM-score 0.97
- 6SKG · Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain · an experimental structure of the same protein · chain A against BK, TM-score 0.97
- 6SKF · Cryo-EM Structure of T. kodakarensis 70S ribosome · an experimental structure of the same protein · chain A against BK, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JJF6
- Elsewhere: UniProt Q5JJF6 · AlphaFold DB Q5JJF6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.