Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L13 (O59300)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L13 (O59300) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O59300
- Type
- protein
- Length
- 142 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x654cA99FE690E45Cc9f7BFCF270BAaB0901241CB
- Molecule
- 50S ribosomal protein L13
- UniProt
- O59300
- Pockets
- 1 · best druggability 0.37
Structure
1 distinct chain · 49% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L13 | protein | 142 | 49% helix, 15% strand | O59300 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 68 | 0.37 | 0.77 | 19 | empty |
Compared structures
- 1J3A · Crystal structure of ribosomal protein L13 from Pyrococcus horikoshii · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 1J3A · Crystal structure of ribosomal protein L13 from pyrococcus horikoshii · an experimental structure of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O59300
- Elsewhere: UniProt O59300 · AlphaFold DB O59300
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