Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L10E (Q4JC84)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L10E (Q4JC84) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4JC84
- Type
- protein
- Length
- 176 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- 50S ribosomal protein L10E
- UniProt
- Q4JC84
- Pockets
- 2 · best druggability 0.40
Structure
1 distinct chain · 31% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L10E | protein | 176 | 31% helix, 27% strand | Q4JC84 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 139 | 0.40 | 0.74 | 19 | empty |
| 2 | 50 | 0.27 | 0.74 | 12 | empty |
Compared structures
- 8HKU · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.86
- 8HKV · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.85
- 8HL1 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.85
- 8HKY · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.85
- 8HL3 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.85
- 8HL4 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.85
- 8HL2 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.84
- 8HKZ · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.83
- 8HL5 · Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome · an experimental structure of the same protein · chain A against L10E, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4JC84
- Elsewhere: UniProt Q4JC84 · AlphaFold DB Q4JC84
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