Research workbench
AlphaFold monomer V2.0 prediction for 50S ribosomal protein L22, chloroplastic (P09594)
Analyse AlphaFold monomer V2.0 prediction for 50S ribosomal protein L22, chloroplastic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P09594
- Type
- protein
- Length
- 199 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5f52992B4a43bD0b5eF8c2d85e64BcEA92cFc15b
- Molecule
- 50S ribosomal protein L22, chloroplastic
- UniProt
- P09594
- Pockets
- 1 · best druggability 0.55
Structure
1 distinct chain · 45% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 50S ribosomal protein L22, chloroplastic | protein | 199 | 45% helix, 22% strand | P09594 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 257 | 0.55 | 0.77 | 27 | empty |
Compared structures
- 5MMM · Structure of the 70S chloroplast ribosome · an experimental structure of the same protein · chain A against T, TM-score 0.85
- 5MMI · Structure of the large subunit of the chloroplast ribosome · an experimental structure of the same protein · chain A against T, TM-score 0.85
- 5MMI · Structure of the large subunit of the chloroplast ribosome · an experimental structure of the same protein · chain A against T, TM-score 0.85
- 6ERI · Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor · an experimental structure of the same protein · chain A against AS, TM-score 0.85
- 5MLC · Cryo-EM structure of the spinach chloroplast ribosome reveals the location of… · an experimental structure of the same protein · chain A against U, TM-score 0.74
- 5MLC · Cryo-EM structure of the spinach chloroplast ribosome reveals the location of… · an experimental structure of the same protein · chain A against U, TM-score 0.74
- 5H1S · Structure of the large subunit of the chloro-ribosome · an experimental structure of the same protein · chain A against U, TM-score 0.70
- 5H1S · Structure of the large subunit of the chloro-ribosome · an experimental structure of the same protein · chain A against U, TM-score 0.70
- 5X8P · Structure of the 70S chloroplast ribosome from spinach · an experimental structure of the same protein · chain A against T, TM-score 0.69
- 5X8T · Structure of the 50S large subunit of chloroplast ribosome from spinach · an experimental structure of the same protein · chain A against T, TM-score 0.69
- 5X8T · Structure of the 50S large subunit of chloroplast ribosome from spinach · an experimental structure of the same protein · chain A against T, TM-score 0.69
- 4V61 · Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the… · an experimental structure of the same protein · chain A against BU, TM-score 0.53
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09594
- Elsewhere: UniProt P09594 · AlphaFold DB P09594
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