AlphaFold monomer V2.0 prediction for 50S ribosomal protein L13, chloroplastic (P12629)

Structure

1 distinct chain · 28% helix, 12% strand (DSSP).

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 5MMI · Structure of the large subunit of the chloroplast ribosome · an experimental structure of the same protein · chain A against K, TM-score 0.79
• 5MMI · Structure of the large subunit of the chloroplast ribosome · an experimental structure of the same protein · chain A against K, TM-score 0.79
• 5MMM · Structure of the 70S chloroplast ribosome · an experimental structure of the same protein · chain A against K, TM-score 0.79
• 6ERI · Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor · an experimental structure of the same protein · chain A against AJ, TM-score 0.78
• 5MLC · Cryo-EM structure of the spinach chloroplast ribosome reveals the location of… · an experimental structure of the same protein · chain A against L, TM-score 0.77
• 5MLC · Cryo-EM structure of the spinach chloroplast ribosome reveals the location of… · an experimental structure of the same protein · chain A against L, TM-score 0.77
• 5X8T · Structure of the 50S large subunit of chloroplast ribosome from spinach · an experimental structure of the same protein · chain A against K, TM-score 0.73
• 5X8T · Structure of the 50S large subunit of chloroplast ribosome from spinach · an experimental structure of the same protein · chain A against K, TM-score 0.73
• 5X8P · Structure of the 70S chloroplast ribosome from spinach · an experimental structure of the same protein · chain A against K, TM-score 0.73
• 5H1S · Structure of the large subunit of the chloro-ribosome · an experimental structure of the same protein · chain A against L, TM-score 0.58
• 5H1S · Structure of the large subunit of the chloro-ribosome · an experimental structure of the same protein · chain A against L, TM-score 0.58
• 4V61 · Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the… · an experimental structure of the same protein · chain A against BL, TM-score 0.48

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P12629
• Elsewhere: UniProt P12629 · AlphaFold DB P12629