AlphaFold monomer V2.0 prediction for ribosome-inactivating protein momordin I (P16094)

Structure

1 distinct chain · 37% helix, 22% strand (DSSP).

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 5CF9 · Cleavage of nicotinamide adenine dinucleotide by the ribosome inactivating protein of… · an experimental structure of the same protein · chain A against B, TM-score 0.86
• 4YP2 · Cleavage of nicotinamide adenine dinucleotides by the ribosome inactivating protein from… · an experimental structure of the same protein · chain A against B, TM-score 0.86
• 4YP2 · Cleavage of nicotinamide adenine dinucleotides by the ribosome inactivating protein from… · an experimental structure of the same protein · chain A against B, TM-score 0.86
• 1AHA · The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal… · an experimental structure of the same protein · chain A against A, TM-score 0.86
• 1AHA · The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal… · an experimental structure of the same protein · chain A against A, TM-score 0.86
• 1MOM · Crystal structure of momordin, a type I ribosome inactivating protein from the seeds of… · an experimental structure of the same protein · chain A against A, TM-score 0.86
• 1MOM · Crystal structure of momordin, a type I ribosome inactivating protein from the seeds of… · an experimental structure of the same protein · chain A against A, TM-score 0.86
• 6LOW · Crystal structure of alpha-momorcharin in complex with gmp · an experimental structure of the same protein · chain A against A, TM-score 0.86
• 6LOW · crystal structure of alpha-momorcharin in complex with GMP · an experimental structure of the same protein · chain A against A, TM-score 0.86
• 6LOQ · Crystal structure of alpha-momorcharin in complex with camp · an experimental structure of the same protein · chain A against A, TM-score 0.86
• 6LOQ · crystal structure of alpha-momorcharin in complex with cAMP · an experimental structure of the same protein · chain A against A, TM-score 0.86
• 1AHC · The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal… · an experimental structure of the same protein · chain A against A, TM-score 0.86

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P16094
• Elsewhere: UniProt P16094 · AlphaFold DB P16094