Research workbench
AlphaFold monomer V2.0 prediction for ribosomal oxygenase 2 (Q8CD15)
Analyse AlphaFold monomer V2.0 prediction for ribosomal oxygenase 2 (Q8CD15) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8CD15
- Type
- protein
- Length
- 465 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xcA4666226e8eb241f4855C37073ac960730355Bd
- Molecule
- Ribosomal oxygenase 2
- UniProt
- Q8CD15
- Pockets
- 4 · best druggability 0.65
Structure
1 distinct chain · 33% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal oxygenase 2 | protein | 465 | 33% helix, 22% strand | Q8CD15 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 446 | 0.65 | 0.78 | 67 | empty |
| 2 | 190 | 0.50 | 0.77 | 25 | empty |
| 3 | 123 | 0.40 | 0.75 | 28 | empty |
| 4 | 75 | 0.32 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8CD15
- Elsewhere: UniProt Q8CD15 · AlphaFold DB Q8CD15
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