Research workbench
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase AT1G63170 (Q8LDB8)
Analyse AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase AT1G63170… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8LDB8
- Type
- protein
- Length
- 381 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2A3fB0b56B9d09445eFeB7C267536EF817dd7D
- Molecule
- E3 ubiquitin-protein ligase AT1G63170
- UniProt
- Q8LDB8
- Pockets
- 2 · best druggability 0.56
Structure
1 distinct chain · 57% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase AT1G63170 | protein | 381 | 57% helix, 7% strand | Q8LDB8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 279 | 0.56 | 0.77 | 22 | empty |
| 2 | 64 | 0.34 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8LDB8
- Elsewhere: UniProt Q8LDB8 · AlphaFold DB Q8LDB8
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