Research workbench

AlphaFold monomer V2.0 prediction for regulating synaptic membrane exocytosis protein 1 (Q86UR5)

Analyse AlphaFold monomer V2.0 prediction for regulating synaptic membrane exocytosis… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q86UR5
Type: protein
Length: 1,692 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0D671490EE06E75975e90D7F99F73B20BE618744
Molecule: Regulating synaptic membrane exocytosis protein 1
UniProt: Q86UR5
Pockets: 7 · best druggability 0.50

Structure

1 distinct chain · 9% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Regulating synaptic membrane exocytosis protein 1	protein	1692	9% helix, 12% strand	Q86UR5

Pockets

7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	201	0.50	0.76	29	empty
2	216	0.47	0.74	23	empty
3	121	0.36	0.73	19	empty
4	99	0.35	0.74	25	empty
5	63	0.33	0.76	14	empty

Compared structures

2CSS · Solution structure of the PDZ domain of human KIAA0340 protein · an experimental structure of the same protein · chain A against A, TM-score 0.06
2CSS · Solution structure of the PDZ domain of human KIAA0340 protein · an experimental structure of the same protein · chain A against A, TM-score 0.06

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q86UR5
Elsewhere: UniProt Q86UR5 · AlphaFold DB Q86UR5

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