Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (A4Y2Z8)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4Y2Z8
- Type
- protein
- Length
- 472 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x12ceACDE91Ae941833d54d530C9dd3e7e3fF3414
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- A4Y2Z8
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 36% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 472 | 36% helix, 21% strand | A4Y2Z8 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 945 | 0.81 | 0.82 | 69 | empty |
| 2 | 177 | 0.51 | 0.78 | 25 | empty |
| 3 | 55 | 0.48 | 0.85 | 16 | empty |
| 4 | 124 | 0.47 | 0.78 | 22 | empty |
| 5 | 114 | 0.43 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4Y2Z8
- Elsewhere: UniProt A4Y2Z8 · AlphaFold DB A4Y2Z8
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