Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (B3QIV5)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3QIV5
- Type
- protein
- Length
- 441 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC764bb93158c6E826f614C91fC4Ed374eEF7014E
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- B3QIV5
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 35% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 441 | 35% helix, 23% strand | B3QIV5 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 477 | 0.76 | 0.84 | 46 | empty |
| 2 | 234 | 0.59 | 0.80 | 36 | empty |
| 3 | 94 | 0.51 | 0.83 | 25 | empty |
| 4 | 66 | 0.46 | 0.83 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3QIV5
- Elsewhere: UniProt B3QIV5 · AlphaFold DB B3QIV5
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