Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (Q9I541)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9I541
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0AACa73f331d590962E9c98677F8a4D4244A70A1
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- Q9I541
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 34% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 440 | 34% helix, 23% strand | Q9I541 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 529 | 0.76 | 0.83 | 47 | empty |
| 2 | 96 | 0.54 | 0.84 | 22 | empty |
| 3 | 69 | 0.45 | 0.82 | 16 | empty |
| 4 | 118 | 0.38 | 0.74 | 18 | empty |
| 5 | 55 | 0.33 | 0.78 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I541
- Elsewhere: UniProt Q9I541 · AlphaFold DB Q9I541
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